The instant film is a cool idea, it could look really good. Remember though, you need to swap the left-right images on the print. So the instant print will need to be cut, swapped and remounted.
At the risk of angering the Hybrid gods, I will say that I just use StereoPhotoMaker software. It's free and is a boon for printing stereocards or creating stereo output of any kind.
Also, many folks expose slide film and view the images with a slide viewer. Holga now have a 120-format 3D slide viewer and they sell cheap stereo mounts for 120 film.

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