Dear Justin.

If your negatives scan well, and the color balance is OK (Do you had a close look to the grey-tones? Is there a color crossover somewhere? What about shadow regions, is visible Information detectable, ... I do presume so, the LD densities which indicate film speed are OK) I would suspect the reference strips beyond expiration date. In the end this is just a piece of (very accurate) exposed Film, and the latent image will suffer over time…

Next suspicion would be wrong calibration or wrong filters (status M?) of the densitometer, or a mixing Error of the chemicals, or contaminated developer. But as dramatic as it looks on your examined / measured strips you would clearly recognize faults in the scan too. This would be a weird combination of Red-Cyan and Green-Magenta color crossover over the greytablet…

Here is a link to Kodak's Process monitoring and troubleshooting guide
http://www.photolabs.ru/manualc41.pdf

Regards Stefan